Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918507.1_cds_XP_016467943.1_60639
CDS Infomation

[gene=LOC107790524] [db_xref=GeneID:107790524] [protein=potassium channel SKOR-like] [protein_id=XP_016467943.1] [location=complement(join(31506..31709,32359..32439,32596..32891,34063..34402,35240..35303,35411..35635,37238..37482))] [gbkey=CDS]
Sequence

ATGGATAGAGGAAAAAGAAGAGGTGAAGATTCAGAAGATGACGAATTTAAGGTTGAAGAT
GTTCAAGAAAGTTCCAACTCCAAGAAATTAGCCTCTAATTGGAAGAATCGCTTCAAGCTT
TTGAGGAACTACTCTAGTCTTGACACCAATAATGTTAGTGTTAGAAATGGAGATCAAGGG
AGAGACAGTACGAGCAGGGGACGTAGAGATCACTGCTATGGATTTGTTATTCATCCCGAT
AATTGGTGGTACCTGTTGTGGACTCAATTCATTCTGATATGGGCGATTTACTCCTCCTTC
TTCACTCCCATGGAGTTTGGGTTTTTCAGAGGACTCCCCGAAAATCTGTTCCTACTGGAC
ATTGCCGGCCAAATTGCTTTCCTCATCGACATCGTCGTTCTCTTTTTTGTTGCGTATCGA
GACGCTCATTCTTACTGCATGGTCTACGACCGTAAACTCATTGCCCTTCGGTACTTGAAA
TCTCGTTTCCTGGTGGACTTGCTAGGTTGCTTCCCATGGGATGCTATATACAAGGCTTGT
GGAAGAAAGGAGCCAGTTAGATACCTCTTATGGATTAGGCTAAGCCGAGCCCTTAGAGTG
ACAGAGTTTTTTGAAAAGCTGGAGAAAGACATCCGTCTAAATTATCTGTTTACAAGGATT
GTGAAGTTATTAGCTGTCGAAGTATACTGCACTCACACAGCTGCTTGTATTTTTTACTAT
CTGGCTACTACATTGCCTCCATGGGAAGAAGGTTACACGTGGATAGGAAGCCTGAAGATG
GGTGACTATAGTTATGCACATTTCCGAGACATTGATCTTTGGACTCGCTATATCACATCT
TTGTACTTTGCCATTGTCACCATGGCAACTGTTGGTTATGGAGAAATTCATGCAGTCAAT
ACCAAGGAAATGATATTTGTAATGATTTATGTCTCTTTTGACATGATTCTTGGTGCCTAC
CTACTTGGTAATATGGCAGCATTAATTGTAAAAGGATCCAAAACTGAAAAGTTCAGGGAT
AAAATGGCAGATCTTATAAAGTATATGAACAGAAACAAGCTGGGAAAGCGCATAAGCAAA
GAGATCAAAGATCATGTCAGATTACAGTATGAGAGCCGGTATAATGAGTCTTCTGTTCTT
CAGGATATTCCTGCTTCAATTCGAGCTAAGATTTCGCAAAAGCTGTATGAGCCCTACATC
AGAGGAGTCCCACTTTTCAGAGGTTGCTCGCATGAATTTATCAAACAGATTGCAATCAAA
GTACATGAAGAATTTTTCCTTCCAGGGGAAGTGATTATGGAACAGGGTAGCATGGCAGAT
CAACTGTATTTTGTCTGTCATGGTAAAGTGGTATGGTTTCCATCTCTTGAATTCCATTGT
CATACTAAACGATATGCTAAGGGAAGATTGTTAAACCTAGGCAGAGAAATAAAATGGAAG
CAGCAGCAGCTGTAG

Peptide Sequence

PEP ID

XP_016467943.1
PEP Infomation

PREDICTED: potassium channel SKOR-like [Nicotiana tabacum]
Sequence

MDRGKRRGEDSEDDEFKVEDVQESSNSKKLASNWKNRFKLLRNYSSLDTNNVSVRNGDQG
RDSTSRGRRDHCYGFVIHPDNWWYLLWTQFILIWAIYSSFFTPMEFGFFRGLPENLFLLD
IAGQIAFLIDIVVLFFVAYRDAHSYCMVYDRKLIALRYLKSRFLVDLLGCFPWDAIYKAC
GRKEPVRYLLWIRLSRALRVTEFFEKLEKDIRLNYLFTRIVKLLAVEVYCTHTAACIFYY
LATTLPPWEEGYTWIGSLKMGDYSYAHFRDIDLWTRYITSLYFAIVTMATVGYGEIHAVN
TKEMIFVMIYVSFDMILGAYLLGNMAALIVKGSKTEKFRDKMADLIKYMNRNKLGKRISK
EIKDHVRLQYESRYNESSVLQDIPASIRAKISQKLYEPYIRGVPLFRGCSHEFIKQIAIK
VHEEFFLPGEVIMEQGSMADQLYFVCHGKVVWFPSLEFHCHTKRYAKGRLLNLGREIKWK
QQQL

Transcript Sequence

Gene sequence data has not been registered.